Example using MPI_SCAN
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This example uses a user-defined operation to produce a segmented scan. A segmented scan takes, as input, a set of values and a set of logicals, and the logicals delineate the various segments of the scan. For example:
The operator that produces this effect is,
where,
Note that this is a non-commutative operator. C code that implements it is given below.
typedef struct { double val; int log; } SegScanPair;Note that the inout argument to the user-defined function/* the user-defined function */ void segScan( SegScanPair *in, SegScanPair *inout, int *len, MPI_Datatype *dptr ) { int i; SegScanPair c;
for (i=0; i< *len; ++i) { if ( in->log == inout->log ) c.val = in->val + inout->val; else c.val = inout->val; c.log = inout->log; *inout = c; in++; inout++; } }
corresponds to the right-hand operand of the operator. When using
this operator, we must be careful to specify that it is non-commutative,
as in the following.
int i,base; SeqScanPair a, answer; MPI_Op myOp; MPI_Datatype type[2] = {MPI_DOUBLE, MPI_INT}; MPI_Aint disp[2]; int blocklen[2] = { 1, 1}; MPI_Datatype sspair;/* explain to MPI how type SegScanPair is defined */ MPI_Address( a, disp); MPI_Address( a.log, disp+1); base = disp[0]; for (i=0; i<2; ++i) disp[i] -= base; MPI_Type_struct( 2, blocklen, disp, type, &sspair ); MPI_Type_commit( &sspair ); /* create the segmented-scan user-op */ MPI_Op_create( segScan, False, &myOp ); ... MPI_Scan( a, answer, 1, sspair, myOp, root, comm );
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